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Keto Chocolate Cupcakes

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5 from 43 votes
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Rich and decadent chocolate cream cheese frosting on top of moist keto chocolate cupcakes will be your favorite keto dessert. This easy keto cupcake recipe is also low carb, gluten-free, grain-free, sugar-free, and Trim Healthy Mama friendly. Only 4 net carbs!

two rows of keto chocolate cupcakes with chocolate cream cheese icing on a cooling rack close up

No doubt about it, chocolate cakes are delicious. But you may not want the extra carbs from a regular chocolate cake. Learn how to make low carb chocolate cupcakes here. Keto Chocolate Cupcakes are moist and have a delicious texture.

Anytime I make a recipe that focuses on chocolate I have five little eager taste testers waiting to lick the mixers, the spoon, and then the bowl. These chocolate cupcakes were no exception. And the chocolate cream cheese icing was ready for even more tastes and little fingers sneaking their way into the bowl.

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chocolate cream cheese iced chocolate cupcake with cupcake wrapper pulled back on a cooling rack close upPin

Ingredients

Almond Flour – I prefer almond flour in most low-carb gluten-free baked goods. It gives a tender crumb in cakes, cookies, and biscuits.

Coconut Flour –  Just a little bit of coconut flour goes a long way. Coconut flour helps to balance the oiliness of almond flour since it is naturally drier and absorbs more liquid than other alternative flours.

Cocoa Powder or Cacao Powder – I’m currently using raw cacao powder which can be used for cocoa powder. Costco has Navitas Cacao Powder for a good price. I like the flavor in my baked goods.

Butter or Coconut Oil – You can use either butter or Coconut Oil in this recipe – When I use coconut oil I choose to use refined coconut oil to avoid a coconut flavor.

Vanilla – Vanilla extract enhances the other flavors in the cupcakes.

Sweetener – I use a blend of erythritol, stevia, and xylitol (or allulose). By using a combination of sweeteners you reduce the aftertaste that can occur.

Almond Milk – Any unsweetened nut milk or carton coconut milk will work.

ingredients for keto chocolate cupcakes placed in individual containers from above

How to Make Keto Chocolate Cupcakes

This is an easy one-bowl cupcake recipe.

Step One: Mix the dry ingredients, add the wet ingredients, and then mix. You can mix them in a large mixing bowl by hand with a wooden spoon, with a hand mixer, or with an electric mixer, whichever you prefer.

mixing bowl of chocolate cupcake batter next to a sheet pan of empty cupcake wrappers and an ice cream scoop

Step Two: Scoop the batter into greased cupcake papers in a muffin tin.

muffin tin filled with scooped portions of keto chocolate cupcake batter with ice cream scoop

Step Three: Bake the cupcakes. They should feel firm to the touch and not jiggle.

keto chocolate cupcakes on cooling rack with no icing

How to Make Keto Chocolate Frosting

Making chocolate cream cheese frosting is just as easy as making the cupcake batter. First, you mix the butter and cream cheese. Next, you add the cocoa and powdered erythritol. Add a little vanilla and thin with almond milk if necessary.

Your chocolate cream cheese icing is ready to spoon into a piping bag, spread directly on the cooled cupcakes, or just eat with a spoon. Not that I’ve ever done that.

Or try these with regular Keto Cream Cheese Frosting.

Variations

Mini Cupcakes – Make the cupcakes into minis by using two mini muffin tins. Reduce the baking time to 12-15 minutes.

Other Frostings – Try them with peanut butter frosting, buttercream frosting, or whipped heavy cream.

chocolate cream cheese iced chocolate cupcakes on a cooling rack with frosting piping bag from abovePin

Common Questions

What is easiest way to fill cupcake liners?

I love my cookie scoops. I have three different sizes and use them for everything from cookies to cupcakes to meatballs. The largest size is perfect for filling cupcakes. This helps the cupcakes bake evenly since they will all have the exact same amount of batter.

How do I tell if cupcakes are done baking?

When I’m baking the first thing I notice when my cupcakes are almost done is that my house smells delicious. That chocolate flavor starts to waft out of the oven. Next, the timer normally goes off. When that happens I do two2 things. The first is I gently press the center of the cupcakes to see if they spring back up. The second is I will test them with a toothpick. If it comes out clean they are done.

Can I use this keto chocolate frosting for cake?

Absolutely! For a two-layer cake, you will need to double the chocolate cream cheese frosting recipe and for a three-layer cake, I would triple it unless you are using a different filling.

What other types of cake and cupcakes can I use this icing on?

Chocolate Champagne Cupcakes with Raspberry Frosting – You can use this frosting on my chocolate champagne cupcakes – leave in the raspberry filling and top each cupcake with a few fresh raspberries for an amazing presentation

Sour Cream Keto Cupcakes – Prefer the combination of yellow cake topped with chocolate icing? This recipe is for you.

Classic Yellow Keto Birthday Cake with Chocolate Icing – You can easily sub this cream cheese icing for the chocolate buttercream on my keto birthday cake.

Peanut Butter Whoopie Pies – Love chocolate and peanut butter together? Fill my peanut butter whoopie pies with this chocolate cream cheese icing!

Love Vanilla? Try this keto chocolate frosting on my Keto Vanilla Cake!

chocolate cupcakes with chocolate cream cheese icing arranged on tablePin

 

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chocolate cream cheese iced chocolate cupcake with cupcake wrapper pulled back on a cooling rack close up

Keto Chocolate Cupcakes

Taryn Scarfone
Rich and decadent chocolate cream cheese frosting on top of moist keto chocolate cupcakes will be your favorite keto dessert.
5 from 43 votes
Prep Time 15 minutes
Cook Time 25 minutes
Total Time 40 minutes
Course Dessert
Cuisine American
Servings 8
Calories 237.9

Ingredients
 
 

Chocolate Cupcakes:

Chocolate Frosting:

Instructions
 

Chocolate Cupcakes:

  • Preheat the oven to 375 F and spray muffin tins with oil.
  • In a large bowl mix the dry ingredients - coconut flour, almond flour, cocoa powder, sweetener, baking powder and the pinch of salt- until all the ingredients are fully incorporated.
  • Add the eggs, unsweetened almond milk, butter, and vanilla extract. Mix for 2-3 minutes until fully incorporated.
  • Using a spoon or a ¼ measuring cup pour the batter evenly among the tins.
  • Bake for 25 minutes, stick a toothpick into the center of one cupcake to make sure cupcakes are done (they are done if it comes out clean).
  • Remove from the oven, carefully take them out of the muffin tins, place them on a cooling rack and let them cool off for at least 15 minutes.

Chocolate Cream Cheese Frosting:

  • While cupcakes are cooling off, in a medium bowl add the softened cream cheese and butter, whisk with the electric mixer for about two minutes until creamy.
  • Add the sweetener, cocoa powder, vanilla extract, continue mixing until thick and creamy.
  • Frosting should be creamy, but not runny. If the frosting it’s too dense add the tablespoons of almond milk one by one.
  • Once you achieve the desired consistency, fill a piping bag with the frosting.
  • Add the frosting to the cupcakes, start by adding a dollop in the center of the cupcake. Hold the bag perpendicular to the cupcake. Going around the dollop in the center, start frosting the cupcake around the edge. As you complete a full circle, move the piping bag slightly inward to create the next circle, do that for another 2 more circles.
  • Storage the cupcakes in a container with a lid.

Notes

Nutrition: The nutrition facts are for one cupcake with frosting. There are 4.5 NET carbs per serving.
Notes on Sweeteners: 
I use my own blend of xylitol, erythritol, and stevia in my recipes. This is twice as sweet as sugar. It is comparable to Trim Healthy Mama Gentle Sweet and Truvia.
To sub in Swerve or Lakanto Monk Fruit use 1.5 times the amount of sweetener called for. 
 
To sub in Pyure or Trim Healthy Mama Super Sweet use half the amount of sweetener called for.
 
Substitutions will work in most recipes. They may not work in candies, such as caramel.
 
 

Nutrition

Serving: 1cupcakeCalories: 237.9Carbohydrates: 8.8gProtein: 7gFat: 20.7gSaturated Fat: 9.8gPolyunsaturated Fat: 1gMonounsaturated Fat: 4.3gTrans Fat: 0.2gCholesterol: 97.9mgSodium: 145.9mgPotassium: 164.3mgFiber: 4.3gSugar: 1.8gVitamin A: 549.6IUCalcium: 107.5mgIron: 1.4mg
Love this recipe?Please leave a 5 star rating!

Originally Published April 4, 2019. Revised and Republished July 14, 2022.

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49 Comments

  1. Great cupcakes!! Any idea why my frosting is a really light brown and not dark like your pictures? I triple checked the amount of cocoa powder.

    1. It could just be the brand of cocoa powder used. I like using dark cocoa powder. The black cocoa powder is fun too and gives an ‘oreo’ flavor.

  2. Is the mixture supposed to be a lot thicker than normal mixture?
    I converted the mixture to metric and the almond milk is in grams -is this correct? 🙂

    1. This batter is pretty thick. My conversion software automatically puts liquid in grams for some reason but you can use ml if that seems better.

    2. Love the cupcakes! They are dense, yet quite moist!! It’s very chocolatey!!!
      Thank you for sharing your recipe. I’m going to try your other recipes!5 stars

  3. This recipe is for keto chocolate cupcakes but I don’t see the net carbs listed or the sugar alcohols so that I can calculate the net carbs. Do you know the net carbs for one cupcake with the frosting please?

  4. I want to know how many calories in one cupcake without frosting? Me and my husband are in low calories diet, so I think your chocolate cupcakes would fit in our diet.
    Thanks 😊
    Ban

      1. Great thank you! Will the baking time need to be adjusted if I double the recipe then (for a cake), if so what to?

        Thanks so much!

    1. Yes, in the cupcake, as long as it’s a blend like Lakanto that is 1:1 for sugar. You would need to grind it or use a powdered version in the icing.

  5. None of the sugar free grain free desserts I have made in the last 2 years has really tasted as good as the real thing. Well, I made these last night and they are amazing!!! I am sooooo happy 🙂5 stars

  6. This frosting is so delicious! I was having a major chocolate craving and I didn’t feel like waiting for anything to bake so I just whipped up this frosting and it was so yummy! I only used 1/3 cup of sweetener and two heaping tablespoons of cocoa powder. I also sprinkled in some powdered espresso for added flavor. Consistency is awesome! Would definitely make this again.5 stars

  7. I made the frosting only for birthday cupcakes and it was fantastic! I used Spenda with 1.5 tablespoons of cornstarch instead of the powdered erythritol as it upsets the hubby’s stomach. Perfect consistency and taste. Thanks so much for all the recipes 🙂5 stars

  8. I made these last night…they are sooooo good!!!!! I brought some to share at work, and they were a HUGE HIT there, too. My hubby loves them, and this recipe is definitely going into the FAMILY FAVE FILE!!!5 stars

5 from 43 votes (33 ratings without comment)

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