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Cottage Cheese Pumpkin Muffins

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5 from 2 votes
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These easy Cottage Cheese Pumpkin Muffins are packed with protein and flavor. They are perfect this time of year, and are made using simple ingredients you probably already have at home. Enjoy your fall season with these low-carb, high-protein muffins. 

cottage cheese pumpkin muffins in half and stacked to show moist texture

Pumpkin cottage cheese muffins are the in thing this fall. They are a perfect grab-and-go breakfast or snack. You can even add some icing on top and change them into cupcakes.

It’s such an easy recipe that you can have for all your daily breakfasts, without feeling any guilt. Now is the perfect time to make this healthy muffin recipe!

Speaking of cottage cheese recipes, be sure to try these Cottage Cheese Crepes and this Whipped Cottage Cheese Dessert as two of my other top picks.

poster image with balsamic chicken
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plate with cottage cheese pumpkin muffins

Ingredients

  • Almond flour – Adds a nice depth of flavor to the muffins. 
  • Coconut flour – Adds a nice coconut flavor. 
  • Joy Filled Eats sweetener – My go-to sweetener for low carb recipes. 
  • Cinnamon or pumpkin spice – Either option works. 
  • Baking powder – Gives the muffins a fluffy texture. 
  • Pumpkin puree – Don’t confuse this with pumpkin pie filling (which has added sugar). 
  • Coconut oil – Helps add a healthy fat to the muffins. 
  • Cottage cheese – All cottage cheese brands will work. 
  • Eggs – The binding agent for the dry ingredients. 
  • Vanilla extract  – Adds a nice pop of vanilla flavor. 

See the printable recipe card for quantities.

ingredients in small bowls

How to Make Cottage Cheese Pumpkin Muffins

Preheat the oven to 350 degrees. Add eight paper lines in a muffin tin. Spray them with cooking spray. 

dry ingredients in bowl

Step One: ​Add the dry ingredients to a mixing bowl and stir. 

wet ingredient added to bowl

Step Two: Next, add the wet ingredients and mix. Don’t overmix. Stir until just incorporated. 

batter in bowl

Step Three: Scrape down the sides of the bowl. The batter will be thick.

batter in paper liners

Step Four: Divide the muffin batter between the eight prepared liners.

baked muffins in pan

Step Five: Place the muffin pan in the oven and bake for 45-55 minutes or until they are no longer jiggly and the edges are golden brown. Cover with foil, if needed.

cottage cheese pumpkin muffins on wire rack

Step Six: Cool in the pans for 10 minutes and then transfer to a wire rack. Enjoy!

Top Tip💡

These do take a long time to bake. And ovens can vary a lot. You want to bake until they are no longer jiggly. If needed, cover the top with aluminum foil so it doesn’t get too dark.

Variations

  • Protein powder – Adding protein powder in place of the coconut flour ups the protein power even more. Adding vanilla protein powder would be a good flavor choice for pumpkin protein muffins but you may want to reduce the sweetener.
  • Dark chocolate chips – Everyone loves the flavor combo of pumpkin and chocolate! You could use semi-sweet chocolate chips or white chocolate chips as well. 

See this Keto Pumpkin Bread for another one of my favorite low carb fall recipes!

one of the cottage cheese pumpkin muffins sitting on its paper liner

Equipment

You don’t need a ton of equipment to make these low-carb pumpkin muffins. A hand mixer, a large mixing bowl, paper towels, and a muffin pan are really all you need! 

Storage

Once you make a batch of these muffins, all you have to do is let them cool to room temperature and store them in an airtight container. Plan on keeping them in the fridge to stay fresh. 

You can also freeze these muffins to enjoy later. 

cottage cheese pumpkin muffins on wire rack close up

Common Questions

What toppings could I add to pumpkin muffins?

You can add any toppings that you want! Just keep in mind that any additional ingredients that you add will change the carb and nutritional value.

Some topping ideas could be a drizzle of cream cheese frosting, a dusting of powdered sugar, or even a little bit of cinnamon sugar right on top.

Why are my muffins dense?

You may have overstirred the muffins. Keep in mind that you should stir just until the wet ingredients and dry ingredients are combined.

Do I need to store these in the fridge?

I always do because of the added cottage cheese. With the dairy addition, it’s important to regulate the temperature.

If you’re not a fan of eating cold muffins, you can always take them out of the fridge and let them come to room temperature or warm them in the microwave for a short amount of time.

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cottage cheese pumpkin muffins in half and stacked to show moist texture

Cottage Cheese Pumpkin Muffins

Taryn Scarfone
This easy Cottage Cheese Pumpkin Muffins Recipe is packed with protein and flavor. Enjoy these delicious muffins for a snack or breakfast. 
5 from 2 votes
Prep Time 5 minutes
Cook Time 40 minutes
Total Time 45 minutes
Course Breakfast, Snack
Cuisine American
Servings 8 muffins
Calories 241.1

Ingredients
 
 

Instructions
 

  • Preheat oven to 350. Put 8 paper liners in a muffin pan and spray with cooking spray.
  • Stir together the dry ingredients.
  • Add the wet ingredients and mix just until they are incorporated.
  • Divide the batter between the prepared muffin tin.
  • Bake for 45-55 minutes or until no longer jiggly and golden around the edges.

Notes

Nutrition: this recipe makes 8 muffins. The nutrition facts are for one muffin. There are 4.5 NET carbs per serving.
Notes on Sweeteners: 
I use my own blend of xylitol, erythritol, and stevia in my recipes. This is twice as sweet as sugar. It is comparable to Trim Healthy Mama Gentle Sweet and Truvia.
To sub in Swerve or Lakanto Monk Fruit use 1.5 times the amount of sweetener called for. 
 
To sub in Pyure or Trim Healthy Mama Super Sweet use half the amount of sweetener called for.
 
Substitutions will work in most recipes. They may not work in candies, such as caramel.

Nutrition

Serving: 1muffinCalories: 241.1Carbohydrates: 8.2gProtein: 6.7gFat: 21.6gSaturated Fat: 13.1gPolyunsaturated Fat: 0.6gMonounsaturated Fat: 1.6gTrans Fat: 0.01gCholesterol: 63.6mgSodium: 77mgPotassium: 136.6mgFiber: 3.7gSugar: 2gVitamin A: 3683.2IUVitamin C: 1mgCalcium: 73.8mgIron: 1.2mg
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5 Comments

  1. 😋 LOOKS YUM 👏🏼👏🏼👍🏼😋DO YOU think This Can be Made into Mug CAKES? JUST wondering 😊Thanks for sharing ❤️ We Do Have Vanilla protein And Thank you FOR mentioning ABOUT cutting Back on The sugar IF you ADD it 👍🏼❤️❗️Appreciate it 😊G-d❤️Bless ❗️5 stars

5 from 2 votes

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